Source code for obspy.clients.syngine.client
# -*- coding: utf-8 -*-
"""
ObsPy client for the EarthScope/IRIS Syngine service.
:copyright:
The ObsPy Development Team (devs@obspy.org)
:license:
GNU Lesser General Public License, Version 3
(https://www.gnu.org/copyleft/lesser.html)
"""
import collections.abc
import io
import zipfile
import numpy as np
import obspy
from obspy.core import AttribDict
from ..base import WaveformClient, HTTPClient, DEFAULT_USER_AGENT, \
ClientHTTPException
[docs]
class Client(WaveformClient, HTTPClient):
"""
Client for the EarthScope/IRIS Syngine service.
"""
[docs]
def __init__(self, base_url="http://service.iris.edu/irisws/syngine/1",
user_agent=DEFAULT_USER_AGENT, debug=False, timeout=20):
"""
Initializes a Syngine Client.
:param base_url: The base URL of the service.
:type base_url: str
:param user_agent: The user agent sent along the HTTP request.
:type user_agent: str
:param debug: Debug on/off.
:type debug: bool
:param timeout: The socket timeout.
:type timeout: float
"""
HTTPClient.__init__(self, debug=debug, timeout=timeout,
user_agent=user_agent)
# Make sure the base_url does not end with a slash.
base_url = base_url.rstrip("/")
self._base_url = base_url
[docs]
def _handle_requests_http_error(self, r):
msg = "HTTP code %i when downloading '%s':\n\n%s" % (
r.status_code, r.url, r.text)
raise ClientHTTPException(msg.strip())
[docs]
def get_model_info(self, model_name):
"""
Get some information about a particular model.
.. rubric:: Example
>>> from obspy.clients.syngine import Client
>>> c = Client()
>>> db_info = c.get_model_info(model_name="ak135f_5s")
>>> print(db_info.period)
5.125
:param model_name: The name of the model. Case insensitive.
:type model_name: str
:returns: A dictionary with more information about any model.
:rtype: :class:`obspy.core.util.attribdict.AttribDict`
"""
model_name = model_name.strip().lower()
r = self._download(self._get_url("info"),
params={"model": model_name})
info = AttribDict(r.json())
# Convert slip and sliprate into numpy arrays for easier handling.
info.slip = np.array(info.slip, dtype=np.float64)
info.sliprate = np.array(info.sliprate, dtype=np.float64)
return info
[docs]
def get_available_models(self):
"""
Get information about all available velocity models.
"""
r = self._download(self._get_url("models"))
return r.json()
[docs]
def get_service_version(self):
"""
Get the service version of the remote Syngine server.
"""
r = self._download(self._get_url("version"))
return r.text
[docs]
def _convert_parameters(self, model, **kwargs):
model = model.strip().lower()
if not model:
raise ValueError("Model must be given.")
params = {"model": model}
# Error handling is mostly delegated to the actual Syngine service.
# Here we just check that the types are compatible.
str_arguments = ["network", "station", "networkcode", "stationcode",
"locationcode", "eventid", "label", "components",
"units", "format"]
float_arguments = ["receiverlatitude", "receiverlongitude",
"sourcelatitude", "sourcelongitude",
"sourcedepthinmeters", "scale", "dt"]
int_arguments = ["kernelwidth"]
time_arguments = ["origintime"]
for keys, t in ((str_arguments, str),
(float_arguments, float),
(int_arguments, int),
(time_arguments, obspy.UTCDateTime)):
for key in keys:
try:
value = kwargs[key]
except KeyError:
continue
if value is None:
continue
value = t(value)
# String arguments are stripped and empty strings are not
# allowed.
if t is str:
value = value.strip()
if not value:
raise ValueError("String argument '%s' must not be "
"an empty string." % key)
params[key] = t(value)
# These can be absolute times, relative times or phase relative times.
temporal_bounds = ["starttime", "endtime"]
for key in temporal_bounds:
try:
value = kwargs[key]
except KeyError:
continue
if value is None:
continue
# If a number, convert to a float.
elif isinstance(value, (int, float)):
value = float(value)
# If a string like object, attempt to parse it to a datetime
# object, otherwise assume it`s a phase-relative time and let the
# Syngine service deal with the error handling.
elif isinstance(value, str):
try:
value = obspy.UTCDateTime(value)
except Exception:
pass
# Last but not least just try to pass it to the datetime
# constructor without catching the error.
else:
value = obspy.UTCDateTime(value)
params[key] = value
# These all have to be lists of floats. Otherwise it fails.
source_mecs = ["sourcemomenttensor",
"sourcedoublecouple",
"sourceforce"]
for key in source_mecs:
try:
value = kwargs[key]
except KeyError:
continue
if value is None:
continue
value = ",".join(["%g" % float(_i) for _i in value])
params[key] = value
return params
def __read_to_stream(self, r):
with io.BytesIO(r.content) as buf:
# First try to read the file in a normal way, otherwise assume
# it's a saczip file.
try:
st = obspy.read(buf)
except Exception:
st = obspy.Stream()
# Seek as some bytes might have been already read.
buf.seek(0, 0)
zip_obj = zipfile.ZipFile(buf)
for name in zip_obj.namelist():
# Skip the log file.
if name.lower() == "syngine.log":
continue
with io.BytesIO(zip_obj.read(name)) as buf_2:
st += obspy.read(buf_2)
return st
[docs]
def get_waveforms(
self, model, network=None, station=None,
receiverlatitude=None, receiverlongitude=None,
networkcode=None, stationcode=None, locationcode=None,
eventid=None, sourcelatitude=None, sourcelongitude=None,
sourcedepthinmeters=None, sourcemomenttensor=None,
sourcedoublecouple=None, sourceforce=None, origintime=None,
starttime=None, endtime=None, label=None, components=None,
units=None, scale=None, dt=None, kernelwidth=None,
format="miniseed", filename=None):
"""
Request waveforms using the Syngine service.
This method is strongly tied to the actual implementation on the
server side. The default values and all the exception handling are
deferred to the service. Please see `the Syngine documentation
<https://ds.iris.edu/ds/products/syngine/>`_ for more details and the
default values of all parameters.
.. rubric:: Example
>>> from obspy.clients.syngine import Client
>>> client = Client()
>>> st = client.get_waveforms(model="ak135f_5s", network="IU",
... station="ANMO",
... eventid="GCMT:C201002270634A")
>>> print(st) # doctest: +ELLIPSIS
3 Trace(s) in Stream:
IU.ANMO.SE.MXZ | 2010-02-27T06:35:14... - ... | 4.0 Hz, 15520 samples
IU.ANMO.SE.MXN | 2010-02-27T06:35:14... - ... | 4.0 Hz, 15520 samples
IU.ANMO.SE.MXE | 2010-02-27T06:35:14... - ... | 4.0 Hz, 15520 samples
:param model: Specify the model.
:type model: str
:param network: Specify a network code combined with ``station`` to
identify receiver coordinates of an operating station.
:type network: str
:param station: Specify a station code combined with ``network`` to
identify receiver coordinates of an operating station.
:type station: str
:param receiverlatitude: Specify the receiver latitude in degrees.
:type receiverlatitude: float
:param receiverlongitude: Specify the receiver longitude in degrees.
:type receiverlongitude: float
:param networkcode: Specify the network code for the synthetics.
Optional when using ``receiverlatitude`` and ``receiverlongitude``.
:type networkcode: str
:param stationcode: Specify the station code for the synthetics.
Optional when using ``receiverlatitude`` and ``receiverlongitude``.
:type stationcode: str
:param locationcode: Specify the location code for the synthetics.
Optional in any usage.
:type locationcode: str
:param eventid: Specify an event identifier in the form
[catalog]:[eventid]. The centroid time and location and moment
tensor of the solution will be used as the source.
:type eventid: str
:param sourcelatitude: Specify the source latitude.
:type sourcelatitude: float
:param sourcelongitude: Specify the source longitude.
:type sourcelongitude: float
:param sourcedepthinmeters: Specify the source depth in meters.
:type sourcedepthinmeters: float
:param sourcemomenttensor: Specify a source in moment tensor
components as a list: ``Mrr``, ``Mtt``, ``Mpp``, ``Mrt``, ``Mrp``,
``Mtp`` with values in Newton meters (*Nm*).
:type sourcemomenttensor: list[float]
:param sourcedoublecouple: Specify a source as a double couple. The
list of values are ``strike``, ``dip``, ``rake`` [, ``M0`` ],
where strike, dip and rake are in degrees and M0 is the scalar
seismic moment in Newton meters (Nm). If not specified, a value
of *1e19* will be used as the scalar moment.
:type sourcedoublecouple: list[float]
:param sourceforce: Specify a force source as a list of ``Fr``, ``Ft``,
``Fp`` in units of Newtons (N).
:type sourceforce: list[float]
:param origintime: Specify the source origin time. This must be
specified as an absolute date and time.
:type origintime: :class:`~obspy.core.utcdatetime.UTCDateTime`
:param starttime: Specifies the desired start time for the synthetic
trace(s). This may be specified as either:
* an absolute date and time
* a phase-relative offset
* an offset from origin time in seconds
If the value is recognized as a date and time, it is interpreted
as an absolute time. If the value is in the form
``phase[+-]offset`` it is interpreted as a phase-relative time,
for example ``P-10`` (meaning P wave arrival time minus 10
seconds). If the value is a numerical value it is interpreted as an
offset, in seconds, from the ``origintime``.
:type starttime: :class:`~obspy.core.utcdatetime.UTCDateTime`, str or
float
:param endtime: Specifies the desired end time for the synthetic
trace(s). This may be specified as either:
* an absolute date and time
* a phase-relative offset
* an offset from start time in seconds
If the value is recognized as a date and time, it is interpreted
as an absolute time. If the value is in the form
``phase[+-]offset`` it is interpreted as a phase-relative time,
for example ``P+10`` (meaning P wave arrival time plus 10
seconds). If the value is a numerical value it is interpreted as an
offset, in seconds, from the ``starttime``.
:type endtime: :class:`~obspy.core.utcdatetime.UTCDateTime`, str
or float
:param label: Specify a label to be included in file names and HTTP
file name suggestions.
:type label: str
:param components: Specify the orientation of the synthetic
seismograms as a list of any combination of ``Z`` (vertical),
``N`` (north), ``E`` (east), ``R`` (radial), ``T`` (transverse)
:type components: str or list[str].
:param units: Specify either ``displacement``, ``velocity`` or
``acceleration`` for the synthetics. The length unit is meters.
:type units: str
:param scale: Specify an amplitude scaling factor. The default
amplitude length unit is meters.
:type scale: float
:param dt: Specify the sampling interval in seconds. Only upsampling
is allowed so this value must be larger than the intrinsic interval
of the model database.
:type dt: float
:param kernelwidth: Specify the width of the sinc kernel used for
resampling to requested sample interval (``dt``), relative to the
original sampling rate.
:type kernelwidth: int
:param format: Specify output file to be either miniSEED or a ZIP
archive of SAC files, either ``miniseed`` or ``saczip``.
:type format: str
:param filename: Will download directly to the specified file. If
given, this method will return nothing.
:type filename: str or file-like object
"""
arguments = {
"network": network,
"station": station,
"receiverlatitude": receiverlatitude,
"receiverlongitude": receiverlongitude,
"networkcode": networkcode,
"stationcode": stationcode,
"locationcode": locationcode,
"eventid": eventid,
"sourcelatitude": sourcelatitude,
"sourcelongitude": sourcelongitude,
"sourcedepthinmeters": sourcedepthinmeters,
"sourcemomenttensor": sourcemomenttensor,
"sourcedoublecouple": sourcedoublecouple,
"sourceforce": sourceforce,
"origintime": origintime,
"starttime": starttime,
"endtime": endtime,
"label": label,
"components": components,
"units": units,
"scale": scale,
"dt": dt,
"kernelwidth": kernelwidth,
"format": format,
"filename": filename}
params = self._convert_parameters(model=model, **arguments)
r = self._download(url=self._get_url("query"), params=params,
filename=filename)
# A given filename will write directly to a file.
if filename:
return
return self.__read_to_stream(r=r)
[docs]
def get_waveforms_bulk(
self, model, bulk,
eventid=None, sourcelatitude=None, sourcelongitude=None,
sourcedepthinmeters=None, sourcemomenttensor=None,
sourcedoublecouple=None, sourceforce=None, origintime=None,
starttime=None, endtime=None, label=None, components=None,
units=None, scale=None, dt=None, kernelwidth=None,
format="miniseed", filename=None, data=None):
"""
Request waveforms for multiple receivers simultaneously.
This method is strongly tied to the actual implementation on the
server side. The default values and all the exception handling are
deferred to the service. Please see the `Syngine documentation
<https://ds.iris.edu/ds/products/syngine/>`_ for more details and the
default values of all parameters.
This method uses the POST functionalities of the Syngine service.
.. rubric:: Example
The `bulk` parameter is a list of either other lists/tuples or
dictionaries. Each item specifies one receiver. Items can be
specified in a number of different ways:
>>> from obspy.clients.syngine import Client
>>> c = Client()
>>> bulk = [
... {"network": "IU", "station": "ANMO"}, # net/sta codes
... {"latitude": 47.0, "longitude": 12.1}, # coordinates
... {"latitude": 47.0, "longitude": 12.1,
... "networkcode": "AA", "stationcode": "BB",
... "locationcode": "CC"}, # optional net/sta/loc
... ["IU", "ANTO"], # net/sta as list
... [33.2, -123.5] # lat/lon as list/tuple
... ]
Just pass that on to the bulk waveform method and retrieve the data.
>>> st = c.get_waveforms_bulk(
... model="ak135f_5s", bulk=bulk, sourcelatitude=12.3,
... sourcelongitude=75.3, sourcedepthinmeters=54321,
... sourcemomenttensor=[1E19, 1E19, 1E19, 0, 0, 0],
... components="Z")
>>> print(st.sort()) # doctest: +ELLIPSIS
5 Trace(s) in Stream:
AA.BB.CC.MXZ | 1900-01-01T00:00:00... - ... | 4.0 Hz, 15520 samples
IU.ANMO.SE.MXZ | 1900-01-01T00:00:00... - ... | 4.0 Hz, 15520 samples
IU.ANTO.SE.MXZ | 1900-01-01T00:00:00... - ... | 4.0 Hz, 15520 samples
XX.S0001.SE.MXZ | 1900-01-01T00:00:00... - ... | 4.0 Hz, 15520 samples
XX.S0002.SE.MXZ | 1900-01-01T00:00:00... - ... | 4.0 Hz, 15520 samples
:param model: Specify the model.
:type model: str
:param bulk: Specify the receivers to download in bulk.
:type bulk: list[list], list[tuple], or list[dict]
:param eventid: Specify an event identifier in the form
[catalog]:[eventid]. The centroid time and location and moment
tensor of the solution will be used as the source.
:type eventid: str
:param sourcelatitude: Specify the source latitude.
:type sourcelatitude: float
:param sourcelongitude: Specify the source longitude.
:type sourcelongitude: float
:param sourcedepthinmeters: Specify the source depth in meters.
:type sourcedepthinmeters: float
:param sourcemomenttensor: Specify a source in moment tensor
components as a list: ``Mrr``, ``Mtt``, ``Mpp``, ``Mrt``, ``Mrp``,
``Mtp`` with values in Newton meters (*Nm*).
:type sourcemomenttensor: list[float]
:param sourcedoublecouple: Specify a source as a double couple. The
list of values are ``strike``, ``dip``, ``rake`` [, ``M0`` ],
where strike, dip and rake are in degrees and M0 is the scalar
seismic moment in Newton meters (Nm). If not specified, a value
of *1e19* will be used as the scalar moment.
:type sourcedoublecouple: list[float]
:param sourceforce: Specify a force source as a list of ``Fr``, ``Ft``,
``Fp`` in units of Newtons (N).
:type sourceforce: list[float]
:param origintime: Specify the source origin time. This must be
specified as an absolute date and time.
:type origintime: :class:`~obspy.core.utcdatetime.UTCDateTime`
:param starttime: Specifies the desired start time for the synthetic
trace(s). This may be specified as either:
* an absolute date and time
* a phase-relative offset
* an offset from origin time in seconds
If the value is recognized as a date and time, it is interpreted
as an absolute time. If the value is in the form
``phase[+-]offset`` it is interpreted as a phase-relative time,
for example ``P-10`` (meaning P wave arrival time minus 10
seconds). If the value is a numerical value it is interpreted as an
offset, in seconds, from the ``origintime``.
:type starttime: :class:`~obspy.core.utcdatetime.UTCDateTime`, str,
or float
:param endtime: Specifies the desired end time for the synthetic
trace(s). This may be specified as either:
* an absolute date and time
* a phase-relative offset
* an offset from start time in seconds
If the value is recognized as a date and time, it is interpreted
as an absolute time. If the value is in the form
``phase[+-]offset`` it is interpreted as a phase-relative time,
for example ``P+10`` (meaning P wave arrival time plus 10
seconds). If the value is a numerical value it is interpreted as an
offset, in seconds, from the ``starttime``.
:type endtime: :class:`~obspy.core.utcdatetime.UTCDateTime`, str,
or float
:param label: Specify a label to be included in file names and HTTP
file name suggestions.
:type label: str
:param components: Specify the orientation of the synthetic
seismograms as a list of any combination of ``Z`` (vertical),
``N`` (north), ``E`` (east), ``R`` (radial), ``T`` (transverse)
:type components: str or list[str].
:param units: Specify either ``displacement``, ``velocity`` or
``acceleration`` for the synthetics. The length unit is meters.
:type units: str
:param scale: Specify an amplitude scaling factor. The default
amplitude length unit is meters.
:type scale: float
:param dt: Specify the sampling interval in seconds. Only upsampling
is allowed so this value must be larger than the intrinsic interval
of the model database.
:type dt: float
:param kernelwidth: Specify the width of the sinc kernel used for
resampling to requested sample interval (``dt``), relative to the
original sampling rate.
:type kernelwidth: int
:param format: Specify output file to be either miniSEED or a ZIP
archive of SAC files, either ``miniseed`` or ``saczip``.
:type format: str
:param filename: Will download directly to the specified file. If
given, this method will return nothing.
:type filename: str or file-like object
:param data: If specified this will be sent directly sent to the
Syngine service as a POST payload. All other parameters except the
``filename`` parameter will be silently ignored. Likely not that
useful for most people.
:type data: dict, bytes, or file-like object
"""
# Send data straight via POST if given.
if data:
r = self._download(url=self._get_url("query"),
data=data, filename=filename)
if filename:
return
return self.__read_to_stream(r=r)
if not bulk:
raise ValueError("Some bulk download information must be given.")
arguments = {
"eventid": eventid,
"sourcelatitude": sourcelatitude,
"sourcelongitude": sourcelongitude,
"sourcedepthinmeters": sourcedepthinmeters,
"sourcemomenttensor": sourcemomenttensor,
"sourcedoublecouple": sourcedoublecouple,
"sourceforce": sourceforce,
"origintime": origintime,
"starttime": starttime,
"endtime": endtime,
"label": label,
"components": components,
"units": units,
"scale": scale,
"dt": dt,
"kernelwidth": kernelwidth,
"format": format,
"filename": filename}
params = self._convert_parameters(model=model, **arguments)
# Assemble the bulk file.
with io.BytesIO() as buf:
# Write the header.
buf.write("model={model}\n".format(**params).encode())
del params["model"]
for key in sorted(params.keys()):
value = params[key]
buf.write("{key}={value}\n".format(key=key,
value=value).encode())
_map = {"networkcode": "NETCODE",
"stationcode": "STACODE",
"locationcode": "LOCCODE"}
# Write the bulk content.
for item in bulk:
# Dictionary like items.
if isinstance(item, collections.abc.Mapping):
if "latitude" in item or "longitude" in item:
if not ("latitude" in item and "longitude" in item):
raise ValueError(
"Item '%s' in bulk must contain both "
"latitude and longitude if either is given." %
str(item))
bulk_item = "{latitude} {longitude}".format(**item)
for _i in ("networkcode", "stationcode",
"locationcode"):
if _i in item:
bulk_item += " %s=%s" % (_map[_i], item[_i])
elif "station" in item and "network" in item:
bulk_item = "{network} {station}".format(
**item)
else:
raise ValueError("Item '%s' in bulk is malformed." %
str(item))
# Iterable items.
elif isinstance(item, collections.abc.Container):
if len(item) != 2:
raise ValueError("Item '%s' in bulk must have two "
"entries." % str(item))
bulk_item = "%s %s" % (item[0], item[1])
else:
raise ValueError("Item '%s' in bulk cannot be parsed." %
str(item))
buf.write((bulk_item.strip() + "\n").encode())
buf.seek(0, 0)
r = self._download(url=self._get_url("query"),
data=buf, filename=filename)
# A given filename will write directly to a file.
if filename:
return
return self.__read_to_stream(r=r)